llwang.net

Peer-reviewed Publications

 

Similarity metrics for determining overlap among biological pathways [pdf]

Wang LL, Gennari, JH.

In press. International Conference on Biomedical Ontology, 2017.

 

Fluctuation analysis of peak expiratory flow and its associations with treatment failure in asthma [pdf]

Kaminsky DA, Wang LL, Bates JH, Thamrin C, Shade DM, Dixon AE, Wise RA, Peters S, Irvin CG.

American Journal of Respiratory and Critical Care Medicine, 2017.

DOI: 10.1164/rccm.201601-0076OC

PMID: 27814453

 

Development of a novel Markov chain model for the prediction of head and neck squamous cell carcinoma dissemination

Jung H, Law A, Grunblatt E, Wang LL, Kusano A, Mejino JLV, Whipple ME.

AMIA Annual Symposium Proceedings, 2016.

PMID: 28269942

 

An analysis of differences in biological pathway resources [pdf]

Wang LL, Gennari JH, Abernethy NF.

Proceedings of the Joint International Conference on Biological Ontology and BioCreative, 2016.

CEUR Workshop Proceedings

 

Biological model development as an opportunity to provide content auditing for the foundational model of anatomy ontology [pdf]

Wang LL, Grunblatt E, Jung H, Kalet IJ, Whipple ME.

AMIA Annual Symposium Proceedings, 2015.

PMID: 26958311

 

Electrical impedance myography in duchenne muscular dystrophy and health controls: a multi-center study of reliability and validity [pdf]

Zaidman CM, Wang LL, Connolly AM, Florence J, Wong BL, Parsons JA, Apkon S, Goyal N, Williams E, Escolar D, Rutkove SB, Bohorquez JL; DART-EIM Clinical Evaluators Consortium.

Muscle & Nerve, 2015.

DOI: 10.1002/mus.24611

PMID: 25702806

 

Electrical impedance myography for monitoring motor neuron loss in the SOD1 G93A amyotrophic lateral sclerosis rat [pdf]

Wang LL, Spieker AJ, Li J, Rutkove SB.

Clinical Neurophysiology, 2011.

DOI: 10.1016/j.clinph.2011.04.021

PMID: 21612980

 

Assessment of alterations in the electrical impedance of muscle after experimental nerve injury via finite-element analysis [pdf]

Wang LL, Ahad M, McEwan A, Li J, Jafarpoor M, Rutkove SB.

IEEE Transactions on Biomedical Engineering, 2011.

DOI: 10.1109/TBME.2011.2104957

PMID: 21224171

 

Conference Activity

 

Similarity metrics for determining overlap among biological pathways

Wang LL, Gennari JH.

Presented at the International Conference on Biomedical Ontology, September 15, 2017, Newcastle upon Tyne, UK.

 

Detection and Functional Classification of Fusion Genes Using Pathway Expression Profiles

Hood T, Wang LL, Abernethy NF.

Presented at the American Medical Informatics Association Joint Summits on Translational Science, March 28, 2017, San Francisco, CA.

 

Development of a novel Markov chain model for the prediction of head and neck squamous cell carcinoma dissemination

Jung H, Law AB, Grunblatt E, Wang LL, Kusano A, Mejino JLV, Whipple ME.

Presented at the American Medical Informatics Association Annual Symposium, November 16, 2016, Chicago, IL.

 

Discovering representational differences between pathway knowledge bases for pathway resource merging

Wang LL, Gennari JH, Abernethy NF.

Presented at the American Medical Informatics Association Annual Symposium, November 15, 2016, Chicago, IL.

 

Auditing tree-like organ systems in the FMA using network motifs

Wang LL, Grunblatt E, Whipple ME.

Presented at the American Medical Informatics Association Annual Symposium, November 15, 2016, Chicago, IL.

 

An analysis of differences in biological pathway resources

Wang LL, Gennari JH, Abernethy NF.

Presented at the Joint International Conference on Biological Ontology and BioCreative, August 3, 2016, Corvallis, OR.

 

Identifying and resolving inconsistencies in biological pathway resources [pdf]

Wang LL, Gennari JH, Abernethy NF.

Presented at the National Library of Medicine (NLM) informatics training conference, June 27, 2016, Columbus, OH.

 

Biological model development as an opportunity to provide content auditing for the foundational model of anatomy ontology

Wang LL, Grunblatt E, Jung H, Kalet IJ, Whipple ME.

Presented at the American Medical Informatics Association Annual Symposium, November 16, 2015, San Francisco, CA.

 

Development of a discharge ontology to support postanesthesia discharge decision making [pdf]

Wang LL, Choi Y.

Presented at the International Conference on Biomedical Ontology, July 27, 2015, Lisbon, Portugal.

 

Ontological content auditing during model creation using the foundational model of anatomy [pdf]

Wang LL, Grunblatt E, Whipple M, Kalet IJ.

Presented at the National Library of Medicine (NLM) informatics training conference, June 23, 2015, Bethesda, MD.

 

Detrended fluctuation analysis of peak expiratory flow and its association with destabilization of asthma control [pdf]

Kaminsky DA, Wang LL, Shade D, Dixon AE, Bates JHT, Irvin CG, Wise RA, Peters SP.

Presented at the international conference of the American Thoracic Society, May 16, 2014, San Diego, CA.

 

Electrical impedance myography in DMD: a multi-center study of reliability and relationships to strength and function

Zaidman C, Bohorquez J, Wang LL, Florence J, Connolly AM, Escolar DM, Williams G.

Presented at the 18th international congress of the World Muscle Society, October, 2013, Asilomar, CA.

 

Courses Taught

 

Biological Pathway Analysis: Trends and Applications

BIME 591, Winter 2017

Department of Biomedical Informatics and Medical Education

University of Washington